BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028H01SP1|AL428971
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1547 1750 0.0
>3x_Contig1547
Length = 9547
Score = 1750 bits (883), Expect = 0.0
Identities = 883/883 (100%)
Strand = Plus / Minus
Query: 1 gatcaagtgctttgataaaaaccctccaagaacaatttgataaagaatatgatgtaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3653 gatcaagtgctttgataaaaaccctccaagaacaatttgataaagaatatgatgtaaatt 3594
Query: 61 tatgcgaatacaacgcttcacatgagggcagtttgaagaatggtccctatctagatgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3593 tatgcgaatacaacgcttcacatgagggcagtttgaagaatggtccctatctagatgtca 3534
Query: 121 atacggttgcgggacttttaaaattatatttcagaaggttgcctcatctaatattcggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3533 atacggttgcgggacttttaaaattatatttcagaaggttgcctcatctaatattcggtg 3474
Query: 181 atgacatgtacgaagagtgtagggtgattgctgaaagaaattcaggaaagccaactgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3473 atgacatgtacgaagagtgtagggtgattgctgaaagaaattcaggaaagccaactgaaa 3414
Query: 241 ctgcattgcagttcagagaattggtatcaaacaagagatttgaaatggaaaattattcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3413 ctgcattgcagttcagagaattggtatcaaacaagagatttgaaatggaaaattattcat 3354
Query: 301 tgatgtttgttttatttgagctattaatgaaaatcaatgaaaataacaaagtcaacaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3353 tgatgtttgttttatttgagctattaatgaaaatcaatgaaaataacaaagtcaacaaga 3294
Query: 361 tgaatcttcgcaatctatgcattgtgttttctccgactttgaacattcctgttaatatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3293 tgaatcttcgcaatctatgcattgtgttttctccgactttgaacattcctgttaatatcc 3234
Query: 421 ttcagccttttgttgaagatttccaatgtattttcaatggaagtgatccagtaaacaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3233 ttcagccttttgttgaagatttccaatgtattttcaatggaagtgatccagtaaacaatg 3174
Query: 481 acgatagacaaaatatcaatcttcagattcctcaaatgtaatataagttaagtaaactat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3173 acgatagacaaaatatcaatcttcagattcctcaaatgtaatataagttaagtaaactat 3114
Query: 541 tgtactaattttaatgaacgaaaaggaaacgagaactatattacagaagaagataaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3113 tgtactaattttaatgaacgaaaaggaaacgagaactatattacagaagaagataaaaaa 3054
Query: 601 ccttccaaacaagcagtacaaggcaagcaattgagactattacttgctgttgtttatgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3053 ccttccaaacaagcagtacaaggcaagcaattgagactattacttgctgttgtttatgca 2994
Query: 661 tggagttgagataattcgcacgaaaataaatatattattgtatagagaaggaaaaaaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2993 tggagttgagataattcgcacgaaaataaatatattattgtatagagaaggaaaaaaagg 2934
Query: 721 tatatacataggaaccgatagtaaatatgagggggggtatgatcagcttctagagaatgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2933 tatatacataggaaccgatagtaaatatgagggggggtatgatcagcttctagagaatgc 2874
Query: 781 taaattcttgctctactcctgcctcttagaacattttcaataaatgattcaccagcttta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2873 taaattcttgctctactcctgcctcttagaacattttcaataaatgattcaccagcttta 2814
Query: 841 taagaggatctaacaagcggaccagatgcacaatataggaaac 883
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2813 taagaggatctaacaagcggaccagatgcacaatataggaaac 2771
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9204
Number of Sequences: 1807
Number of extensions: 9204
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)